Radatools

Functions used for wrapping radatools

http://deim.urv.cat/~sergio.gomez/radatools.php

PrepRada

class neuropype_graph.interfaces.radatools.rada.PrepRada(command=None, **inputs)

Description:

Format net list (format i j weight) to Pajek file

wraps List_To_Net.exe from radatools

Inputs:

net_List_file:

type = File, exists=True, desc=’List of edges describing net in format i j weight’, mandatory=True, position = 0, argstr = “%s”

Pajek_net_file:

type = File, desc=”net description in Pajek format, generated by radatools”,position = 1, argstr = “%s”, name_source = [‘net_List_file’], hash_files = True, name_template=’%s.net’,keep_extension = False

network_type:

type = traits.Enum(“A”,”U”,”D”, usedefault =True, desc=’Type of network, force to undirected’, position = 2, argstr=”%s”)

Outputs:

Pajek_net_file:

type = File, exists=True, desc=”net description in Pajek format, generated by radatools”

NetPropRada

class neuropype_graph.interfaces.radatools.rada.NetPropRada(command=None, **inputs)

Definition:

Launch Network properties on Pajek file with given parameters (see Network_Properties in Radatools)

Inputs:

Pajek_net_file:

type = File, exists=True, desc=’net description in Pajek format’, mandatory=True, position = 0, argstr = “%s”

optim_seq:

type String, default = ‘all 2’,usedefault = True, desc = “Optimisation sequence, see radatools documentation for more information”, position = 1, argstr = ” %s”

Outputs:

rada_log_file: (not used anymore)

type = File, exists=True, desc=”network properties log, generated by radatools”